Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 FAM58CP-201ENST00000435741 640 ntBASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 AC020765.3-201ENST00000613051 740 ntBASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHA4Q9UN74 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 AL161645.1-201ENST00000622716 1255 ntBASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 C20orf181-201ENST00000623918 480 ntBASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 AC092902.6-201ENST00000641783 218 ntBASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHA4Q9UN74 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 AL078644.1-201ENST00000609881 752 ntBASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 PCGF3-213ENST00000620529 1899 ntBASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 ME2P1-201ENST00000426028 1970 ntBASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHA4Q9UN74 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHA4Q9UN74 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHA4Q9UN74 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
PCDHA4Q9UN74 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHA4Q9UN74 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHA4Q9UN74 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHA4Q9UN74 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHA4Q9UN74 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms