Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AP001094.4-201ENST00000579008 2176 ntBASIC15.71■□□□□ 0.11
CTSFQ9UBX1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 KRT18P32-201ENST00000424695 1287 ntBASIC15.71■□□□□ 0.11
CTSFQ9UBX1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AC109322.1-201ENST00000524499 1264 ntBASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AC004449.1-201ENST00000564240 433 ntBASIC15.71■□□□□ 0.11
CTSFQ9UBX1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSFQ9UBX1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTSFQ9UBX1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.71■□□□□ 0.1
CTSFQ9UBX1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 AL645939.2-201ENST00000427340 991 ntBASIC15.7■□□□□ 0.1
CTSFQ9UBX1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 CYMP-203ENST00000474680 1263 ntBASIC15.7■□□□□ 0.1
CTSFQ9UBX1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 IGHV3-62-201ENST00000520057 340 ntBASIC15.7■□□□□ 0.1
CTSFQ9UBX1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.7■□□□□ 0.1
CTSFQ9UBX1 AC021097.1-201ENST00000607902 574 ntBASIC15.7■□□□□ 0.1
CTSFQ9UBX1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 LINC00628-201ENST00000628516 1289 ntBASIC15.7■□□□□ 0.1
CTSFQ9UBX1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSFQ9UBX1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms