Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 CYMP-203ENST00000474680 1263 ntBASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 KRT18P34-201ENST00000488218 1270 ntBASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 AC027307.2-201ENST00000591252 911 ntBASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 AC106028.4-201ENST00000614509 607 ntBASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 KRT8P39-201ENST00000396270 1433 ntBASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE7Q9UBL6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 AP001094.4-201ENST00000579008 2176 ntBASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 AC124067.4-201ENST00000519691 2379 ntBASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE7Q9UBL6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 AL645728.1-201ENST00000366221 2101 ntBASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 SNX33P1-201ENST00000592116 1762 ntBASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 AC084121.4-201ENST00000641598 221 ntBASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 AF228730.8-201ENST00000642140 221 ntBASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE7Q9UBL6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms