Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.92■□□□□ 0.46
CNTN3Q9P232 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTN3Q9P232 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTN3Q9P232 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.92■□□□□ 0.46
CNTN3Q9P232 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.92■□□□□ 0.46
CNTN3Q9P232 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC142381.1-201ENST00000426099 345 ntBASIC17.91■□□□□ 0.46
CNTN3Q9P232 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 CYMP-203ENST00000474680 1263 ntBASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC105233.2-201ENST00000523697 349 ntBASIC17.91■□□□□ 0.46
CNTN3Q9P232 AF228730.5-201ENST00000530288 346 ntBASIC17.91■□□□□ 0.46
CNTN3Q9P232 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC015911.4-201ENST00000588022 1070 ntBASIC17.91■□□□□ 0.46
CNTN3Q9P232 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AP001059.3-201ENST00000619053 235 ntBASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTN3Q9P232 AC006538.1-201ENST00000567905 1585 ntBASIC17.91■□□□□ 0.46
CNTN3Q9P232 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTN3Q9P232 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 RBPMS2P1-201ENST00000437762 623 ntBASIC17.9■□□□□ 0.46
CNTN3Q9P232 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CNTN3Q9P232 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTN3Q9P232 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNTN3Q9P232 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNTN3Q9P232 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.89■□□□□ 0.46
CNTN3Q9P232 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNTN3Q9P232 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CNTN3Q9P232 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 SPDYE14P-201ENST00000442619 822 ntBASIC17.89■□□□□ 0.45
CNTN3Q9P232 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 PRYP6-201ENST00000514804 343 ntBASIC17.89■□□□□ 0.45
CNTN3Q9P232 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 AL355385.1-201ENST00000606123 409 ntBASIC17.89■□□□□ 0.45
CNTN3Q9P232 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms