Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 AD001527.2-201ENST00000622994 785 ntBASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALCOCO1Q9P1Z2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 AL590627.1-203ENST00000421194 1026 ntBASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 BX640515.1-201ENST00000617215 977 ntBASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CALCOCO1Q9P1Z2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.33■□□□□ 0.53
CALCOCO1Q9P1Z2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AC132008.2-207ENST00000454517 770 ntBASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AC109462.3-201ENST00000573934 613 ntBASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AC064862.7-201ENST00000604520 867 ntBASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AL591684.3-201ENST00000605187 298 ntBASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AP001269.4-201ENST00000609611 512 ntBASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 LINC01451-201ENST00000623792 534 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms