Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 LPO-204ENST00000543544 2350 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 MIR3665-201ENST00000578708 105 ntBASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 AC044849.2-201ENST00000606596 710 ntBASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 AC061975.6-201ENST00000579045 1553 ntBASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 AC092135.3-201ENST00000624151 1846 ntBASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 MAPK10-262ENST00000641051 5738 ntBASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
CDC42SE1Q9NRR8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 DUX4L29-201ENST00000425409 679 ntBASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 MYLKP1-201ENST00000509077 1580 ntBASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 BNIP3P1-202ENST00000550043 1585 ntBASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CDC42SE1Q9NRR8 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms