Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 VN2R19P-201ENST00000442399 1052 ntBASIC17.65■□□□□ 0.42
CD248Q9HCU0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 AC092865.6-201ENST00000642101 219 ntBASIC17.65■□□□□ 0.42
CD248Q9HCU0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD248Q9HCU0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD248Q9HCU0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD248Q9HCU0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD248Q9HCU0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD248Q9HCU0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD248Q9HCU0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CD248Q9HCU0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD248Q9HCU0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CD248Q9HCU0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CD248Q9HCU0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CD248Q9HCU0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CD248Q9HCU0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CD248Q9HCU0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.64■□□□□ 0.42
CD248Q9HCU0 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.64■□□□□ 0.42
CD248Q9HCU0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CD248Q9HCU0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 IGLL3P-201ENST00000412472 434 ntBASIC17.64■□□□□ 0.41
CD248Q9HCU0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 AP006288.1-201ENST00000446065 395 ntBASIC17.64■□□□□ 0.41
CD248Q9HCU0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.64■□□□□ 0.41
CD248Q9HCU0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD248Q9HCU0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 BX276092.7-203ENST00000637198 1536 ntBASIC17.63■□□□□ 0.41
CD248Q9HCU0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 AL805961.1-202ENST00000641562 540 ntBASIC17.63■□□□□ 0.41
CD248Q9HCU0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD248Q9HCU0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CD248Q9HCU0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms