Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AL138966.2-201ENST00000621997 464 ntBASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AP006294.2-201ENST00000641667 209 ntBASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 KRT18P22-201ENST00000402024 1347 ntBASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.26□□□□□ -0.61
SND1-IT1Q9HBX3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AC126177.1-201ENST00000547829 2218 ntBASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AC111152.3-201ENST00000569699 673 ntBASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SND1-IT1Q9HBX3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms