Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AC002056.1-201ENST00000395613 760 ntBASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 PMS2P4-201ENST00000412466 1052 ntBASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AL009183.1-201ENST00000603760 355 ntBASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AL078644.1-201ENST00000609881 752 ntBASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AC023511.2-201ENST00000618803 211 ntBASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AC091812.2-201ENST00000619081 385 ntBASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 PCDHA12-202ENST00000613593 2588 ntBASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC4Q9HBW1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 SNX33P1-201ENST00000592116 1762 ntBASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC4Q9HBW1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 UPF3AP3-201ENST00000420996 769 ntBASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 GPX1P2-201ENST00000429271 606 ntBASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC4Q9HBW1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms