Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 PCGF3-213ENST00000620529 1899 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AL391005.1-201ENST00000623953 2435 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 POU5F1P6-201ENST00000466990 990 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AC092910.1-201ENST00000482027 1129 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 KRT126P-201ENST00000549467 1181 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 MIR4515-201ENST00000584082 81 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 ACTL9-202ENST00000612068 1252 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AC020765.3-201ENST00000613051 740 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 MIR7706-201ENST00000613747 67 ntBASIC15.97■□□□□ 0.15
BRF2Q9HAW0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRF2Q9HAW0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 AC092364.2-201ENST00000596710 2692 ntBASIC15.96■□□□□ 0.15
BRF2Q9HAW0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 AC108751.1-201ENST00000490852 363 ntBASIC15.96■□□□□ 0.15
BRF2Q9HAW0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 CXCL1P1-201ENST00000502804 216 ntBASIC15.96■□□□□ 0.15
BRF2Q9HAW0 AC093909.1-201ENST00000504731 1122 ntBASIC15.96■□□□□ 0.15
BRF2Q9HAW0 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.96■□□□□ 0.15
BRF2Q9HAW0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
BRF2Q9HAW0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms