Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 AL596087.1-201ENST00000400979 1969 ntBASIC20.58■□□□□ 0.89
UPF2Q9HAU5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 AC083849.1-201ENST00000615227 514 ntBASIC20.58■□□□□ 0.89
UPF2Q9HAU5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
UPF2Q9HAU5 KRT8P49-201ENST00000604166 1432 ntBASIC20.58■□□□□ 0.88
UPF2Q9HAU5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
UPF2Q9HAU5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UPF2Q9HAU5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPF2Q9HAU5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPF2Q9HAU5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.58■□□□□ 0.88
UPF2Q9HAU5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPF2Q9HAU5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 AC073508.3-201ENST00000619697 1419 ntBASIC20.57■□□□□ 0.88
UPF2Q9HAU5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
UPF2Q9HAU5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 AL596275.1-201ENST00000423464 877 ntBASIC20.56■□□□□ 0.88
UPF2Q9HAU5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 AC133561.5-201ENST00000635547 218 ntBASIC20.56■□□□□ 0.88
UPF2Q9HAU5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF2Q9HAU5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms