Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBB1Q9H4B7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 LINC00554-201ENST00000564841 3011 ntBASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 AC021087.4-201ENST00000563761 564 ntBASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBB1Q9H4B7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 REXO1L8P-201ENST00000604378 1897 ntBASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 UPK3BP1-201ENST00000428678 509 ntBASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 AL121772.3-201ENST00000610840 674 ntBASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms