Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 KRT18P27-201ENST00000427733 1299 ntBASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 EMBP1-201ENST00000458200 901 ntBASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 MIR4492-201ENST00000581627 80 ntBASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 AC139530.3-201ENST00000620344 690 ntBASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 AL512652.2-201ENST00000625156 1716 ntBASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF3BQ9BZI7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AC073621.1-201ENST00000392730 636 ntBASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 PMS2P1-201ENST00000431037 1228 ntBASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AC107918.2-201ENST00000530817 355 ntBASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AL662844.1-201ENST00000546340 181 ntBASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AC006557.2-201ENST00000592985 1240 ntBASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AL031008.1-201ENST00000619963 541 ntBASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF3BQ9BZI7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 HNRNPDP1-201ENST00000439535 754 ntBASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 RPS15P9-201ENST00000494093 319 ntBASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 RNPS1P1-201ENST00000507437 918 ntBASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 OR7E14P-202ENST00000530490 1290 ntBASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 AF228730.7-201ENST00000641842 219 ntBASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 AL139011.1-202ENST00000642063 584 ntBASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF3BQ9BZI7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms