Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 ACA64.2-201ENST00000459014 129 ntBASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 AL391256.1-201ENST00000443260 1855 ntBASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH11YQ9BZA8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 SDHAP3-202ENST00000515467 728 ntBASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 AC106886.1-201ENST00000568660 600 ntBASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 AC099568.2-201ENST00000609194 695 ntBASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 AC004461.2-201ENST00000629517 803 ntBASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH11YQ9BZA8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 AC020763.4-201ENST00000623414 4170 ntBASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH11YQ9BZA8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 GPAA1P2-202ENST00000606848 1787 ntBASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 NEFHP1-201ENST00000412845 2629 ntBASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.02
PCDH11YQ9BZA8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11YQ9BZA8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms