Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 IGHGP-201ENST00000390555 1178 ntBASIC11.13□□□□□ -0.63
LITAFQ99732 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 ECEL1P2-202ENST00000465689 757 ntBASIC11.13□□□□□ -0.63
LITAFQ99732 POU5F1P6-201ENST00000466990 990 ntBASIC11.13□□□□□ -0.63
LITAFQ99732 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.13□□□□□ -0.63
LITAFQ99732 STK19B-204ENST00000512515 211 ntBASIC11.13□□□□□ -0.63
LITAFQ99732 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.13□□□□□ -0.63
LITAFQ99732 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 AL136038.4-201ENST00000603606 1261 ntBASIC11.13□□□□□ -0.63
LITAFQ99732 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 AL353692.3-201ENST00000407031 1396 ntBASIC11.13□□□□□ -0.63
LITAFQ99732 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
LITAFQ99732 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.13□□□□□ -0.63
LITAFQ99732 AC092919.2-201ENST00000623631 1645 ntBASIC11.13□□□□□ -0.63
LITAFQ99732 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.13□□□□□ -0.63
LITAFQ99732 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LITAFQ99732 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
LITAFQ99732 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 MIR648-201ENST00000385046 94 ntBASIC11.12□□□□□ -0.63
LITAFQ99732 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC11.12□□□□□ -0.63
LITAFQ99732 AC128676.1-201ENST00000454392 318 ntBASIC11.12□□□□□ -0.63
LITAFQ99732 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.12□□□□□ -0.63
LITAFQ99732 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
LITAFQ99732 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
LITAFQ99732 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LITAFQ99732 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
LITAFQ99732 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LITAFQ99732 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms