Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.83■□□□□ 0.13
NSMCE2Q96MF7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 AP002414.1-201ENST00000391405 1147 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 RNF152P1-201ENST00000397754 604 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 NUS1P1-201ENST00000446295 882 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 AC011467.2-201ENST00000598425 242 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 DBET-201ENST00000630918 3363 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 AC010491.1-201ENST00000563101 2797 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 AC126177.1-201ENST00000547829 2218 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.83■□□□□ 0.12
NSMCE2Q96MF7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 AC113347.1-201ENST00000413321 391 ntBASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SPDYE13P-201ENST00000445314 798 ntBASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 GGT4P-201ENST00000623672 1708 ntBASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 AC006449.6-201ENST00000612330 2296 ntBASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NSMCE2Q96MF7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 TERF1P1-201ENST00000311003 1181 ntBASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms