Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 AL662799.1-202ENST00000614205 422 ntBASIC19.53■□□□□ 0.72
TRIM47Q96LD4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 AC046185.3-201ENST00000623228 1824 ntBASIC19.53■□□□□ 0.72
TRIM47Q96LD4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM47Q96LD4 AC009053.2-201ENST00000563701 2365 ntBASIC19.52■□□□□ 0.72
TRIM47Q96LD4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 HMGA1P7-201ENST00000406908 502 ntBASIC19.52■□□□□ 0.72
TRIM47Q96LD4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 MIR6080-201ENST00000617359 66 ntBASIC19.52■□□□□ 0.72
TRIM47Q96LD4 MIR6752-201ENST00000618442 71 ntBASIC19.52■□□□□ 0.72
TRIM47Q96LD4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM47Q96LD4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM47Q96LD4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM47Q96LD4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM47Q96LD4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 MRPS18AP1-201ENST00000414458 589 ntBASIC19.51■□□□□ 0.71
TRIM47Q96LD4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms