Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SUSD3Q96L08 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.58■□□□□ 0.41
SUSD3Q96L08 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SUSD3Q96L08 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SUSD3Q96L08 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SUSD3Q96L08 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SUSD3Q96L08 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.58■□□□□ 0.41
SUSD3Q96L08 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 AC093724.1-201ENST00000448659 1027 ntBASIC17.58■□□□□ 0.4
SUSD3Q96L08 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 AC097493.3-201ENST00000509725 367 ntBASIC17.58■□□□□ 0.4
SUSD3Q96L08 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 AC003101.2-201ENST00000612557 442 ntBASIC17.58■□□□□ 0.4
SUSD3Q96L08 AJ011932.1-201ENST00000621707 465 ntBASIC17.58■□□□□ 0.4
SUSD3Q96L08 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.58■□□□□ 0.4
SUSD3Q96L08 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SUSD3Q96L08 LETM1P2-201ENST00000597330 2178 ntBASIC17.57■□□□□ 0.4
SUSD3Q96L08 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 AC092580.3-201ENST00000430932 139 ntBASIC17.57■□□□□ 0.4
SUSD3Q96L08 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUSD3Q96L08 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.57■□□□□ 0.4
SUSD3Q96L08 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 INGX-202ENST00000489074 768 ntBASIC17.56■□□□□ 0.4
SUSD3Q96L08 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUSD3Q96L08 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.56■□□□□ 0.4
SUSD3Q96L08 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms