Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 AC092364.2-202ENST00000597012 1073 ntBASIC16.6■□□□□ 0.25
ARRDC3Q96B67 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 AP3S2-216ENST00000617003 1561 ntBASIC16.6■□□□□ 0.25
ARRDC3Q96B67 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARRDC3Q96B67 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 FAM8A3P-201ENST00000427218 844 ntBASIC16.59■□□□□ 0.25
ARRDC3Q96B67 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.59■□□□□ 0.25
ARRDC3Q96B67 AL031731.1-201ENST00000642131 2094 ntBASIC16.58■□□□□ 0.25
ARRDC3Q96B67 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARRDC3Q96B67 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 SPDYE7P-202ENST00000420373 878 ntBASIC16.58■□□□□ 0.24
ARRDC3Q96B67 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 KLF2P3-201ENST00000451977 1087 ntBASIC16.58■□□□□ 0.24
ARRDC3Q96B67 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 RARRES2P9-201ENST00000565168 469 ntBASIC16.58■□□□□ 0.24
ARRDC3Q96B67 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 AC011467.4-201ENST00000594891 528 ntBASIC16.58■□□□□ 0.24
ARRDC3Q96B67 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 RNF216P1-203ENST00000404404 2427 ntBASIC16.58■□□□□ 0.24
ARRDC3Q96B67 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
ARRDC3Q96B67 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ARRDC3Q96B67 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.57■□□□□ 0.24
ARRDC3Q96B67 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms