Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.64■□□□□ 0.25
TTC28Q96AY4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.64■□□□□ 0.25
TTC28Q96AY4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.64■□□□□ 0.25
TTC28Q96AY4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
TTC28Q96AY4 AC138951.2-201ENST00000623455 1161 ntBASIC16.64■□□□□ 0.25
TTC28Q96AY4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TTC28Q96AY4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC28Q96AY4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TTC28Q96AY4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TTC28Q96AY4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 C2orf27AP3-201ENST00000434123 579 ntBASIC16.63■□□□□ 0.25
TTC28Q96AY4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 AL354718.3-201ENST00000616414 581 ntBASIC16.63■□□□□ 0.25
TTC28Q96AY4 AC005702.4-201ENST00000618393 416 ntBASIC16.63■□□□□ 0.25
TTC28Q96AY4 CR382287.1-201ENST00000623954 586 ntBASIC16.63■□□□□ 0.25
TTC28Q96AY4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 AC006001.1-201ENST00000325130 474 ntBASIC16.63■□□□□ 0.25
TTC28Q96AY4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TTC28Q96AY4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 AHCYP2-201ENST00000430630 1300 ntBASIC16.63■□□□□ 0.25
TTC28Q96AY4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC28Q96AY4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 MIR769-201ENST00000390225 118 ntBASIC16.62■□□□□ 0.25
TTC28Q96AY4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC28Q96AY4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC28Q96AY4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 RN7SL181P-201ENST00000462921 277 ntBASIC16.61■□□□□ 0.25
TTC28Q96AY4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 RPSAP36-202ENST00000494591 1261 ntBASIC16.61■□□□□ 0.25
TTC28Q96AY4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 DGAT2L7P-201ENST00000602462 744 ntBASIC16.61■□□□□ 0.25
TTC28Q96AY4 AC133539.2-201ENST00000604757 467 ntBASIC16.61■□□□□ 0.25
TTC28Q96AY4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC28Q96AY4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC28Q96AY4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms