Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 KRT18P67-201ENST00000432816 1264 ntBASIC16.3■□□□□ 0.2
NCLNQ969V3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.3■□□□□ 0.2
NCLNQ969V3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NCLNQ969V3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 RNPS1P1-201ENST00000507437 918 ntBASIC16.3■□□□□ 0.2
NCLNQ969V3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.3■□□□□ 0.2
NCLNQ969V3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.3■□□□□ 0.2
NCLNQ969V3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 AL662844.1-201ENST00000546340 181 ntBASIC16.3■□□□□ 0.2
NCLNQ969V3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NCLNQ969V3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.3■□□□□ 0.2
NCLNQ969V3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.3■□□□□ 0.2
NCLNQ969V3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NCLNQ969V3 AC064862.7-201ENST00000604520 867 ntBASIC16.3■□□□□ 0.2
NCLNQ969V3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.3■□□□□ 0.2
NCLNQ969V3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NCLNQ969V3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NCLNQ969V3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NCLNQ969V3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NCLNQ969V3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.3■□□□□ 0.2
NCLNQ969V3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
NCLNQ969V3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCLNQ969V3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.29■□□□□ 0.2
NCLNQ969V3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NCLNQ969V3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.29■□□□□ 0.2
NCLNQ969V3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCLNQ969V3 AL020989.1-201ENST00000422979 469 ntBASIC16.29■□□□□ 0.2
NCLNQ969V3 STK19B-204ENST00000512515 211 ntBASIC16.29■□□□□ 0.2
NCLNQ969V3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.29■□□□□ 0.2
NCLNQ969V3 AC021087.4-201ENST00000563761 564 ntBASIC16.29■□□□□ 0.2
NCLNQ969V3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.29■□□□□ 0.2
NCLNQ969V3 STK25P1-201ENST00000585406 838 ntBASIC16.29■□□□□ 0.2
NCLNQ969V3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.29■□□□□ 0.2
NCLNQ969V3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.29■□□□□ 0.2
NCLNQ969V3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.29■□□□□ 0.2
NCLNQ969V3 AC148477.8-201ENST00000624298 468 ntBASIC16.29■□□□□ 0.2
NCLNQ969V3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.29■□□□□ 0.2
NCLNQ969V3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NCLNQ969V3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NCLNQ969V3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NCLNQ969V3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
NCLNQ969V3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCLNQ969V3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.29■□□□□ 0.2
NCLNQ969V3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 SIGLEC16-201ENST00000599858 1437 ntBASIC16.28■□□□□ 0.2
NCLNQ969V3 AC004817.3-201ENST00000602957 2129 ntBASIC16.28■□□□□ 0.2
NCLNQ969V3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.28■□□□□ 0.2
NCLNQ969V3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.28■□□□□ 0.2
NCLNQ969V3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
NCLNQ969V3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NCLNQ969V3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NCLNQ969V3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms