Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AC021097.1-201ENST00000607902 574 ntBASIC16.57■□□□□ 0.24
SCAMP4Q969E2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 AC079328.2-201ENST00000561241 3354 ntBASIC16.57■□□□□ 0.24
SCAMP4Q969E2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SCAMP4Q969E2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 TFAMP1-201ENST00000412727 736 ntBASIC16.56■□□□□ 0.24
SCAMP4Q969E2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.56■□□□□ 0.24
SCAMP4Q969E2 KRT8P48-201ENST00000515599 1220 ntBASIC16.56■□□□□ 0.24
SCAMP4Q969E2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 AL135744.1-201ENST00000565098 629 ntBASIC16.56■□□□□ 0.24
SCAMP4Q969E2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 AC105339.1-204ENST00000636249 355 ntBASIC16.56■□□□□ 0.24
SCAMP4Q969E2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAMP4Q969E2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 WASH6P-202ENST00000359512 1437 ntBASIC16.55■□□□□ 0.24
SCAMP4Q969E2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AC243562.1-201ENST00000560672 389 ntBASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AP001160.2-201ENST00000596071 487 ntBASIC16.55■□□□□ 0.24
SCAMP4Q969E2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AC026120.1-201ENST00000611536 926 ntBASIC16.55■□□□□ 0.24
SCAMP4Q969E2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 NKILA-202ENST00000614771 2598 ntBASIC16.55■□□□□ 0.24
SCAMP4Q969E2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AC006538.1-201ENST00000567905 1585 ntBASIC16.55■□□□□ 0.24
SCAMP4Q969E2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.55■□□□□ 0.24
SCAMP4Q969E2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms