Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 AC007274.1-201ENST00000439805 662 ntBASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 AC067852.2-201ENST00000590513 2313 ntBASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 PCDHB17P-201ENST00000539533 2393 ntBASIC21.72■■□□□ 1.07
RAPGEF4Q8WZA2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 GNAQP1-201ENST00000444815 1067 ntBASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 RN7SL618P-201ENST00000477850 296 ntBASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 AC104794.3-201ENST00000566840 1248 ntBASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 AC138969.3-201ENST00000546612 1459 ntBASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 AC138932.2-201ENST00000548268 1459 ntBASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 AC126755.4-201ENST00000549796 1459 ntBASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RAPGEF4Q8WZA2 AC090340.1-201ENST00000620778 4980 ntBASIC21.7■■□□□ 1.07
RAPGEF4Q8WZA2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.7■■□□□ 1.06
RAPGEF4Q8WZA2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms