Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC44A1Q8WWI5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 AL358472.4-201ENST00000633140 710 ntBASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC44A1Q8WWI5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 AC103702.1-201ENST00000548801 2630 ntBASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SLC44A1Q8WWI5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 AC106795.1-205ENST00000512851 1056 ntBASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC44A1Q8WWI5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AC092384.3-202ENST00000564646 2873 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms