Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 RN7SL589P-201ENST00000481268 310 ntBASIC19.62■□□□□ 0.73
STAG1Q8WVM7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STAG1Q8WVM7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 KRT18P34-201ENST00000488218 1270 ntBASIC19.61■□□□□ 0.73
STAG1Q8WVM7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 AC022145.2-201ENST00000598203 171 ntBASIC19.61■□□□□ 0.73
STAG1Q8WVM7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
STAG1Q8WVM7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 METTL21AP1-201ENST00000438852 635 ntBASIC19.6■□□□□ 0.73
STAG1Q8WVM7 SPDYE11-202ENST00000450699 704 ntBASIC19.6■□□□□ 0.73
STAG1Q8WVM7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 SPDYE9P-201ENST00000570642 692 ntBASIC19.6■□□□□ 0.73
STAG1Q8WVM7 AC027612.4-201ENST00000605371 583 ntBASIC19.6■□□□□ 0.73
STAG1Q8WVM7 SPDYE10P-202ENST00000612005 668 ntBASIC19.6■□□□□ 0.73
STAG1Q8WVM7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 SPDYE8P-202ENST00000612377 668 ntBASIC19.6■□□□□ 0.73
STAG1Q8WVM7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.6■□□□□ 0.73
STAG1Q8WVM7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms