Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 GNRHR2-203ENST00000581100 1187 ntBASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 BX284668.4-201ENST00000453917 508 ntBASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 RNA5SP410-201ENST00000516285 106 ntBASIC17.15■□□□□ 0.34
PRUNE2Q8WUY3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.14■□□□□ 0.34
PRUNE2Q8WUY3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 AC093503.3-201ENST00000624917 2352 ntBASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 MIR326-201ENST00000362220 95 ntBASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRUNE2Q8WUY3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 AC120498.9-201ENST00000339021 3867 ntBASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.13■□□□□ 0.33
PRUNE2Q8WUY3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms