Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC063926.2-201ENST00000623766 1308 ntBASIC15.47■□□□□ 0.07
CT55Q8WUE5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.47■□□□□ 0.07
CT55Q8WUE5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 AC244107.1-201ENST00000442033 332 ntBASIC15.47■□□□□ 0.07
CT55Q8WUE5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 AL589739.1-201ENST00000607720 493 ntBASIC15.47■□□□□ 0.07
CT55Q8WUE5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CT55Q8WUE5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
CT55Q8WUE5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 AP005018.1-201ENST00000525475 301 ntBASIC15.46■□□□□ 0.07
CT55Q8WUE5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 RN7SL828P-201ENST00000607615 303 ntBASIC15.46■□□□□ 0.07
CT55Q8WUE5 AC004233.3-201ENST00000607794 1269 ntBASIC15.46■□□□□ 0.07
CT55Q8WUE5 TEX28P1-201ENST00000613479 1221 ntBASIC15.46■□□□□ 0.07
CT55Q8WUE5 TEX28P2-201ENST00000617764 1221 ntBASIC15.46■□□□□ 0.07
CT55Q8WUE5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CT55Q8WUE5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CT55Q8WUE5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CT55Q8WUE5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.46■□□□□ 0.06
CT55Q8WUE5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CT55Q8WUE5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CT55Q8WUE5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CT55Q8WUE5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.45■□□□□ 0.06
CT55Q8WUE5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.45■□□□□ 0.06
CT55Q8WUE5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CT55Q8WUE5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CT55Q8WUE5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CT55Q8WUE5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CT55Q8WUE5 PIN1P1-201ENST00000412108 996 ntBASIC15.45■□□□□ 0.06
CT55Q8WUE5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.45■□□□□ 0.06
CT55Q8WUE5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CT55Q8WUE5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms