Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.52■□□□□ 0.39
SHKBP1Q8TBC3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AC055876.3-201ENST00000431496 288 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AC008677.1-201ENST00000519230 1561 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 MIR4745-201ENST00000577608 62 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 KRT8P49-201ENST00000604166 1432 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AC138649.4-201ENST00000612222 287 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AC008267.7-201ENST00000624570 1194 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AP001350.2-201ENST00000625104 1094 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 AC016027.1-202ENST00000607927 1699 ntBASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHKBP1Q8TBC3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 AC090340.1-201ENST00000620778 4980 ntBASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 MIR943-201ENST00000401286 94 ntBASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 AC125807.1-201ENST00000483097 614 ntBASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 RNA5SP421-201ENST00000516864 134 ntBASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 AP000842.3-202ENST00000569238 1080 ntBASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 AC027307.2-201ENST00000591252 911 ntBASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHKBP1Q8TBC3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms