Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 MIR4515-201ENST00000584082 81 ntBASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH19Q8TAB3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 CRYGEP-201ENST00000412192 528 ntBASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 AC092865.5-201ENST00000545435 363 ntBASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 Z83851.2-201ENST00000609564 659 ntBASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 CYP2T1P-202ENST00000641596 2535 ntBASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 GPAA1P2-202ENST00000606848 1787 ntBASIC17.23■□□□□ 0.35
PCDH19Q8TAB3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 HMGA1P7-201ENST00000406908 502 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms