Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATPAF2Q8N5M1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ATPAF2Q8N5M1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.14■□□□□ 0.34
ATPAF2Q8N5M1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATPAF2Q8N5M1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AL591424.1-201ENST00000442569 1213 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 RNA5SP416-201ENST00000516838 111 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AL031432.2-201ENST00000566714 459 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AC018845.2-201ENST00000568326 409 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AL928711.1-201ENST00000570165 459 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AC023141.13-201ENST00000604991 943 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AC027601.4-201ENST00000611259 610 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AC007064.4-201ENST00000637740 555 ntBASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.14■□□□□ 0.33
ATPAF2Q8N5M1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 AL022342.1-201ENST00000400363 863 ntBASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 RHOQP3-201ENST00000437982 621 ntBASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 AC140113.2-201ENST00000604370 208 ntBASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF2Q8N5M1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 BCAR1-209ENST00000546196 1340 ntBASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF2Q8N5M1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms