Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 SART3-203ENST00000546611 1184 ntBASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 REXO1L6P-202ENST00000619970 1078 ntBASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST3H2AQ7L7L0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 AL645728.1-201ENST00000366221 2101 ntBASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST3H2AQ7L7L0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 AL603756.1-201ENST00000606511 2163 ntBASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 AC006557.2-201ENST00000592985 1240 ntBASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST3H2AQ7L7L0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms