Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 RPS2P28-201ENST00000314255 741 ntBASIC15.26■□□□□ 0.03
NIPAL3Q6P499 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 AC018712.1-201ENST00000455767 687 ntBASIC15.26■□□□□ 0.03
NIPAL3Q6P499 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 AL773604.1-201ENST00000617417 272 ntBASIC15.26■□□□□ 0.03
NIPAL3Q6P499 AC148477.8-201ENST00000624298 468 ntBASIC15.26■□□□□ 0.03
NIPAL3Q6P499 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 AL590787.1-201ENST00000568856 1315 ntBASIC15.25■□□□□ 0.03
NIPAL3Q6P499 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 HNRNPDP1-201ENST00000439535 754 ntBASIC15.25■□□□□ 0.03
NIPAL3Q6P499 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NIPAL3Q6P499 LINC00895-201ENST00000629028 1637 ntBASIC15.25■□□□□ 0.03
NIPAL3Q6P499 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.24■□□□□ 0.03
NIPAL3Q6P499 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms