Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 AC011467.2-201ENST00000598425 242 ntBASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 AC079781.5-202ENST00000641784 3743 ntBASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 HLA-J-201ENST00000462773 1622 ntBASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TMEM53Q6P2H8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 MYCLP1-201ENST00000372451 1075 ntBASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 NUS1P2-201ENST00000417358 873 ntBASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AC002558.1-201ENST00000488906 803 ntBASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 BNIP3P18-201ENST00000593976 575 ntBASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AC138894.3-201ENST00000603787 634 ntBASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AC114341.1-201ENST00000618070 349 ntBASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 AC133963.1-201ENST00000504166 1679 ntBASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM53Q6P2H8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 AC015656.1-201ENST00000624209 3578 ntBASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 PRAL-201ENST00000624952 3286 ntBASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TMEM53Q6P2H8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms