Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 GPAA1P2-202ENST00000606848 1787 ntBASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 CYP2T1P-202ENST00000641596 2535 ntBASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF9Q5VWM5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 AL513480.1-201ENST00000451731 511 ntBASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 RPL13AP23-201ENST00000480739 586 ntBASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 AC096734.2-201ENST00000562054 433 ntBASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 AL391005.1-201ENST00000623953 2435 ntBASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF9Q5VWM5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms