Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 AL606495.2-201ENST00000605867 535 ntBASIC20.76■□□□□ 0.91
RC3H1Q5TC82 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 AC234783.1-201ENST00000441761 496 ntBASIC20.75■□□□□ 0.91
RC3H1Q5TC82 KRT223P-202ENST00000449164 1292 ntBASIC20.75■□□□□ 0.91
RC3H1Q5TC82 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 SNX29P1-201ENST00000548357 1007 ntBASIC20.75■□□□□ 0.91
RC3H1Q5TC82 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 AC015936.2-201ENST00000593177 259 ntBASIC20.75■□□□□ 0.91
RC3H1Q5TC82 AC008735.3-201ENST00000596646 500 ntBASIC20.75■□□□□ 0.91
RC3H1Q5TC82 AC074044.1-201ENST00000609673 707 ntBASIC20.75■□□□□ 0.91
RC3H1Q5TC82 MIR8072-201ENST00000614241 80 ntBASIC20.75■□□□□ 0.91
RC3H1Q5TC82 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RC3H1Q5TC82 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 PCDHB17P-201ENST00000539533 2393 ntBASIC20.74■□□□□ 0.91
RC3H1Q5TC82 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 RARRES2P5-201ENST00000564013 466 ntBASIC20.74■□□□□ 0.91
RC3H1Q5TC82 AC025048.3-201ENST00000590609 569 ntBASIC20.74■□□□□ 0.91
RC3H1Q5TC82 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 AC133552.6-201ENST00000613406 534 ntBASIC20.74■□□□□ 0.91
RC3H1Q5TC82 AC005702.4-201ENST00000618393 416 ntBASIC20.74■□□□□ 0.91
RC3H1Q5TC82 AL033527.5-201ENST00000641382 801 ntBASIC20.74■□□□□ 0.91
RC3H1Q5TC82 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RC3H1Q5TC82 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 BOLA2P3-201ENST00000404566 256 ntBASIC20.73■□□□□ 0.91
RC3H1Q5TC82 FO393414.2-201ENST00000405153 598 ntBASIC20.73■□□□□ 0.91
RC3H1Q5TC82 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms