Protein–RNA interactions for Protein: Q2M238

RRN3P1, Putative RRN3-like protein RRN3P1, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1Q2M238 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 AC079776.2-201ENST00000641154 1609 ntBASIC12.59□□□□□ -0.39
RRN3P1Q2M238 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.59□□□□□ -0.39
RRN3P1Q2M238 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.59□□□□□ -0.39
RRN3P1Q2M238 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 AL355877.3-201ENST00000622820 899 ntBASIC12.59□□□□□ -0.39
RRN3P1Q2M238 PCDHB17P-201ENST00000539533 2393 ntBASIC12.59□□□□□ -0.39
RRN3P1Q2M238 SIGLEC16-201ENST00000599858 1437 ntBASIC12.59□□□□□ -0.39
RRN3P1Q2M238 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RRN3P1Q2M238 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.58□□□□□ -0.39
RRN3P1Q2M238 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
RRN3P1Q2M238 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
RRN3P1Q2M238 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RRN3P1Q2M238 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.58□□□□□ -0.39
RRN3P1Q2M238 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.58□□□□□ -0.39
RRN3P1Q2M238 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 FAAHP1-202ENST00000446499 1238 ntBASIC12.58□□□□□ -0.4
RRN3P1Q2M238 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 AL022326.1-202ENST00000641533 845 ntBASIC12.58□□□□□ -0.4
RRN3P1Q2M238 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 AC138969.2-201ENST00000532739 9932 ntBASIC12.58□□□□□ -0.4
RRN3P1Q2M238 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 AL161772.1-201ENST00000610494 4412 ntBASIC12.58□□□□□ -0.4
RRN3P1Q2M238 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 PCDHA14-201ENST00000506751 2298 ntBASIC12.58□□□□□ -0.4
RRN3P1Q2M238 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RRN3P1Q2M238 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RRN3P1Q2M238 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms