Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 AC016027.1-202ENST00000607927 1699 ntBASIC14.23□□□□□ -0.13
EFNB3Q15768 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
EFNB3Q15768 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB3Q15768 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
EFNB3Q15768 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB3Q15768 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
EFNB3Q15768 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.23□□□□□ -0.13
EFNB3Q15768 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.23□□□□□ -0.13
EFNB3Q15768 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
EFNB3Q15768 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB3Q15768 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB3Q15768 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.23□□□□□ -0.13
EFNB3Q15768 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.23□□□□□ -0.13
EFNB3Q15768 AC015911.4-201ENST00000588022 1070 ntBASIC14.23□□□□□ -0.13
EFNB3Q15768 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.23□□□□□ -0.13
EFNB3Q15768 AL355385.1-201ENST00000606123 409 ntBASIC14.23□□□□□ -0.13
EFNB3Q15768 AC093028.1-201ENST00000622998 982 ntBASIC14.23□□□□□ -0.13
EFNB3Q15768 AL139011.1-202ENST00000642063 584 ntBASIC14.23□□□□□ -0.13
EFNB3Q15768 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB3Q15768 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB3Q15768 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 TNRC18P3-201ENST00000441896 2691 ntBASIC14.23□□□□□ -0.13
EFNB3Q15768 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB3Q15768 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.23□□□□□ -0.13
EFNB3Q15768 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 NKILA-202ENST00000614771 2598 ntBASIC14.23□□□□□ -0.13
EFNB3Q15768 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
EFNB3Q15768 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB3Q15768 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB3Q15768 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
EFNB3Q15768 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
EFNB3Q15768 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB3Q15768 KRT18P34-201ENST00000488218 1270 ntBASIC14.22□□□□□ -0.13
EFNB3Q15768 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.22□□□□□ -0.13
EFNB3Q15768 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 AL512356.2-201ENST00000546955 174 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms