Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SSBP1Q04837 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
SSBP1Q04837 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP1Q04837 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP1Q04837 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP1Q04837 AC069224.1-201ENST00000566372 1715 ntBASIC14.18□□□□□ -0.14
SSBP1Q04837 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 Z83836.1-201ENST00000624605 1642 ntBASIC14.17□□□□□ -0.14
SSBP1Q04837 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 HBZP1-201ENST00000354915 429 ntBASIC14.17□□□□□ -0.14
SSBP1Q04837 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 AC092597.1-201ENST00000487352 616 ntBASIC14.17□□□□□ -0.14
SSBP1Q04837 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 AC073592.5-201ENST00000624854 528 ntBASIC14.17□□□□□ -0.14
SSBP1Q04837 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 TNRC18P2-201ENST00000417666 2714 ntBASIC14.17□□□□□ -0.14
SSBP1Q04837 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSBP1Q04837 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP1Q04837 AC016027.1-202ENST00000607927 1699 ntBASIC14.17□□□□□ -0.14
SSBP1Q04837 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP1Q04837 NORAD-201ENST00000565493 5339 ntBASIC14.17□□□□□ -0.14
SSBP1Q04837 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SSBP1Q04837 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 AL031731.1-201ENST00000642131 2094 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP1Q04837 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 PPT1-215ENST00000641471 2368 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 AL512652.2-201ENST00000625156 1716 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SSBP1Q04837 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 MMP23A-201ENST00000234610 1017 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP1Q04837 NUS1P1-201ENST00000446295 882 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP1Q04837 SIGLEC30P-201ENST00000455569 941 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 AC009533.2-201ENST00000543664 586 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP1Q04837 AL441883.1-201ENST00000566170 1045 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 AC005336.2-201ENST00000593183 939 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.16□□□□□ -0.14
SSBP1Q04837 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 AL671710.1-201ENST00000610245 2349 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.16□□□□□ -0.14
SSBP1Q04837 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP1Q04837 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.16□□□□□ -0.14
SSBP1Q04837 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP1Q04837 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms