Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL20P78556 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 AC097374.2-201ENST00000618617 1306 ntBASIC13.19□□□□□ -0.3
CCL20P78556 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL20P78556 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 AL355802.2-201ENST00000402069 882 ntBASIC13.19□□□□□ -0.3
CCL20P78556 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL20P78556 DUX4L17-201ENST00000557360 1267 ntBASIC13.19□□□□□ -0.3
CCL20P78556 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL20P78556 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 AC068587.6-202ENST00000641839 5619 ntBASIC13.19□□□□□ -0.3
CCL20P78556 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL20P78556 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
CCL20P78556 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL20P78556 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCL20P78556 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL20P78556 REXO1L8P-201ENST00000604378 1897 ntBASIC13.19□□□□□ -0.3
CCL20P78556 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL20P78556 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 AP003680.1-201ENST00000598970 3660 ntBASIC13.18□□□□□ -0.3
CCL20P78556 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL20P78556 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
CCL20P78556 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL20P78556 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 AC009947.2-201ENST00000444014 672 ntBASIC13.18□□□□□ -0.3
CCL20P78556 AC068472.1-201ENST00000474589 881 ntBASIC13.18□□□□□ -0.3
CCL20P78556 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 C1QBPP2-201ENST00000528754 825 ntBASIC13.18□□□□□ -0.3
CCL20P78556 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL20P78556 REXO1L10P-201ENST00000615707 1290 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms