Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL845331.1-201ENST00000424978 1190 ntBASIC18.81■□□□□ 0.6
TPM4P67936 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM4P67936 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TPM4P67936 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TPM4P67936 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM4P67936 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TPM4P67936 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM4P67936 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TPM4P67936 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM4P67936 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM4P67936 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM4P67936 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TPM4P67936 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM4P67936 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM4P67936 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TPM4P67936 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM4P67936 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TPM4P67936 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TPM4P67936 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM4P67936 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM4P67936 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TPM4P67936 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.8■□□□□ 0.6
TPM4P67936 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TPM4P67936 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.8■□□□□ 0.6
TPM4P67936 SPDYE13P-201ENST00000445314 798 ntBASIC18.8■□□□□ 0.6
TPM4P67936 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.8■□□□□ 0.6
TPM4P67936 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM4P67936 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.8■□□□□ 0.6
TPM4P67936 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TPM4P67936 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.8■□□□□ 0.6
TPM4P67936 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM4P67936 AL139011.1-202ENST00000642063 584 ntBASIC18.8■□□□□ 0.6
TPM4P67936 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TPM4P67936 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TPM4P67936 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM4P67936 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM4P67936 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM4P67936 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.79■□□□□ 0.6
TPM4P67936 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TPM4P67936 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.79■□□□□ 0.6
TPM4P67936 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.79■□□□□ 0.6
TPM4P67936 DUX4L17-201ENST00000557360 1267 ntBASIC18.79■□□□□ 0.6
TPM4P67936 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.79■□□□□ 0.6
TPM4P67936 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.79■□□□□ 0.6
TPM4P67936 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.79■□□□□ 0.6
TPM4P67936 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.79■□□□□ 0.6
TPM4P67936 AC083849.1-201ENST00000615227 514 ntBASIC18.79■□□□□ 0.6
TPM4P67936 AC133561.5-201ENST00000635547 218 ntBASIC18.79■□□□□ 0.6
TPM4P67936 KRT8P49-201ENST00000604166 1432 ntBASIC18.79■□□□□ 0.6
TPM4P67936 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.79■□□□□ 0.6
TPM4P67936 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM4P67936 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM4P67936 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM4P67936 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM4P67936 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms