Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HYMAI-201ENST00000635591 3347 ntBASIC16.29■□□□□ 0.2
YBX1P67809 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
YBX1P67809 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.29■□□□□ 0.2
YBX1P67809 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.29■□□□□ 0.2
YBX1P67809 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
YBX1P67809 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.29■□□□□ 0.2
YBX1P67809 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
YBX1P67809 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.29■□□□□ 0.2
YBX1P67809 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 CXCL1P1-201ENST00000502804 216 ntBASIC16.29■□□□□ 0.2
YBX1P67809 PGAM5P1-201ENST00000518923 814 ntBASIC16.29■□□□□ 0.2
YBX1P67809 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.29■□□□□ 0.2
YBX1P67809 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.29■□□□□ 0.2
YBX1P67809 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.29■□□□□ 0.2
YBX1P67809 AL513190.1-201ENST00000621254 727 ntBASIC16.29■□□□□ 0.2
YBX1P67809 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.29■□□□□ 0.2
YBX1P67809 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
YBX1P67809 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.29■□□□□ 0.2
YBX1P67809 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 TOP3BP1-201ENST00000420768 1380 ntBASIC16.28■□□□□ 0.2
YBX1P67809 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.28■□□□□ 0.2
YBX1P67809 AL671710.1-201ENST00000610245 2349 ntBASIC16.28■□□□□ 0.2
YBX1P67809 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.28■□□□□ 0.2
YBX1P67809 AC129492.6-201ENST00000611383 1305 ntBASIC16.28■□□□□ 0.2
YBX1P67809 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 AC024909.3-201ENST00000611513 2257 ntBASIC16.28■□□□□ 0.2
YBX1P67809 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 AC023274.1-201ENST00000418278 595 ntBASIC16.28■□□□□ 0.2
YBX1P67809 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.28■□□□□ 0.2
YBX1P67809 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.28■□□□□ 0.2
YBX1P67809 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.28■□□□□ 0.2
YBX1P67809 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.28■□□□□ 0.2
YBX1P67809 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.28■□□□□ 0.2
YBX1P67809 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.28■□□□□ 0.2
YBX1P67809 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YBX1P67809 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.28■□□□□ 0.2
YBX1P67809 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
YBX1P67809 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
YBX1P67809 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.27■□□□□ 0.2
YBX1P67809 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.27■□□□□ 0.2
YBX1P67809 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.27■□□□□ 0.2
YBX1P67809 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 AL391256.1-201ENST00000443260 1855 ntBASIC16.27■□□□□ 0.2
YBX1P67809 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms