Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
USP46P62068 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP46P62068 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.57■□□□□ 0.4
USP46P62068 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.57■□□□□ 0.4
USP46P62068 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
USP46P62068 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.57■□□□□ 0.4
USP46P62068 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.57■□□□□ 0.4
USP46P62068 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.57■□□□□ 0.4
USP46P62068 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.57■□□□□ 0.4
USP46P62068 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.57■□□□□ 0.4
USP46P62068 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.57■□□□□ 0.4
USP46P62068 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.57■□□□□ 0.4
USP46P62068 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.57■□□□□ 0.4
USP46P62068 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.57■□□□□ 0.4
USP46P62068 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.57■□□□□ 0.4
USP46P62068 AC093028.1-201ENST00000622998 982 ntBASIC17.57■□□□□ 0.4
USP46P62068 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.57■□□□□ 0.4
USP46P62068 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.57■□□□□ 0.4
USP46P62068 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.57■□□□□ 0.4
USP46P62068 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
USP46P62068 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
USP46P62068 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP46P62068 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 AP001094.4-201ENST00000579008 2176 ntBASIC17.56■□□□□ 0.4
USP46P62068 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.56■□□□□ 0.4
USP46P62068 PKD1P1-201ENST00000458669 6805 ntBASIC17.56■□□□□ 0.4
USP46P62068 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
USP46P62068 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.56■□□□□ 0.4
USP46P62068 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
USP46P62068 AKAP8P1-201ENST00000434743 1349 ntBASIC17.56■□□□□ 0.4
USP46P62068 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.56■□□□□ 0.4
USP46P62068 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 PMS2P4-201ENST00000412466 1052 ntBASIC17.56■□□□□ 0.4
USP46P62068 AL627223.1-201ENST00000416693 442 ntBASIC17.56■□□□□ 0.4
USP46P62068 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 SPCS2P4-201ENST00000436160 681 ntBASIC17.56■□□□□ 0.4
USP46P62068 AL592309.1-201ENST00000443127 649 ntBASIC17.56■□□□□ 0.4
USP46P62068 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.56■□□□□ 0.4
USP46P62068 AC023141.5-201ENST00000458585 616 ntBASIC17.56■□□□□ 0.4
USP46P62068 AC069335.1-201ENST00000489972 472 ntBASIC17.56■□□□□ 0.4
USP46P62068 AC109322.1-201ENST00000524499 1264 ntBASIC17.56■□□□□ 0.4
USP46P62068 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.56■□□□□ 0.4
USP46P62068 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
USP46P62068 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.56■□□□□ 0.4
USP46P62068 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
USP46P62068 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
USP46P62068 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
USP46P62068 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
USP46P62068 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.56■□□□□ 0.4
USP46P62068 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.56■□□□□ 0.4
USP46P62068 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.56■□□□□ 0.4
USP46P62068 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP46P62068 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
USP46P62068 AC016027.1-202ENST00000607927 1699 ntBASIC17.55■□□□□ 0.4
USP46P62068 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 AC006277.1-201ENST00000624348 1610 ntBASIC17.55■□□□□ 0.4
USP46P62068 LINC00895-201ENST00000629028 1637 ntBASIC17.55■□□□□ 0.4
USP46P62068 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP46P62068 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms