Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDC42P60953 AL603832.2-201ENST00000566195 2125 ntBASIC15.35■□□□□ 0.05
CDC42P60953 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC42P60953 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.35■□□□□ 0.05
CDC42P60953 AL356309.3-201ENST00000624132 1934 ntBASIC15.35■□□□□ 0.05
CDC42P60953 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDC42P60953 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC42P60953 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC42P60953 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDC42P60953 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC42P60953 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC42P60953 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CDC42P60953 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.34■□□□□ 0.05
CDC42P60953 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC42P60953 AC112907.2-201ENST00000448639 330 ntBASIC15.34■□□□□ 0.05
CDC42P60953 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC42P60953 RN7SL606P-201ENST00000472779 293 ntBASIC15.34■□□□□ 0.05
CDC42P60953 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.34■□□□□ 0.05
CDC42P60953 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC42P60953 AC009533.2-201ENST00000543664 586 ntBASIC15.34■□□□□ 0.05
CDC42P60953 AC010203.1-204ENST00000548782 407 ntBASIC15.34■□□□□ 0.05
CDC42P60953 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC42P60953 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 AC013467.2-201ENST00000605472 835 ntBASIC15.34■□□□□ 0.05
CDC42P60953 AC073592.5-201ENST00000624854 528 ntBASIC15.34■□□□□ 0.05
CDC42P60953 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDC42P60953 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC42P60953 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDC42P60953 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC42P60953 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC42P60953 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC42P60953 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC42P60953 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC42P60953 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC42P60953 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.33■□□□□ 0.05
CDC42P60953 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDC42P60953 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC42P60953 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CDC42P60953 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDC42P60953 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CDC42P60953 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC42P60953 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC42P60953 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.33■□□□□ 0.05
CDC42P60953 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.33■□□□□ 0.05
CDC42P60953 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC42P60953 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC42P60953 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC42P60953 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDC42P60953 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC42P60953 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.33■□□□□ 0.04
CDC42P60953 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC42P60953 AL592071.1-201ENST00000611956 408 ntBASIC15.33■□□□□ 0.04
CDC42P60953 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC42P60953 AD001527.2-201ENST00000622994 785 ntBASIC15.33■□□□□ 0.04
CDC42P60953 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDC42P60953 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CDC42P60953 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
CDC42P60953 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC42P60953 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms