Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC004461.1-201ENST00000412461 403 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 AP006288.1-201ENST00000446065 395 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.62□□□□□ -0.07
FOXG1P55316 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 RARRES2P8-201ENST00000566335 367 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 MIR3909-201ENST00000579518 119 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 AP001160.2-201ENST00000596071 487 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.62□□□□□ -0.07
FOXG1P55316 AC026120.1-201ENST00000611536 926 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 AL139011.1-202ENST00000642063 584 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 AC006538.1-201ENST00000567905 1585 ntBASIC14.61□□□□□ -0.07
FOXG1P55316 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
FOXG1P55316 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.61□□□□□ -0.07
FOXG1P55316 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.61□□□□□ -0.07
FOXG1P55316 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.61□□□□□ -0.07
FOXG1P55316 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 AC022145.2-201ENST00000598203 171 ntBASIC14.61□□□□□ -0.07
FOXG1P55316 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.61□□□□□ -0.07
FOXG1P55316 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.61□□□□□ -0.07
FOXG1P55316 AL161645.1-201ENST00000622716 1255 ntBASIC14.61□□□□□ -0.07
FOXG1P55316 AL513210.1-201ENST00000629608 234 ntBASIC14.61□□□□□ -0.07
FOXG1P55316 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
FOXG1P55316 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FOXG1P55316 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXG1P55316 GGT4P-201ENST00000623672 1708 ntBASIC14.61□□□□□ -0.07
FOXG1P55316 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXG1P55316 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXG1P55316 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXG1P55316 WASH6P-202ENST00000359512 1437 ntBASIC14.6□□□□□ -0.07
FOXG1P55316 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXG1P55316 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXG1P55316 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXG1P55316 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms