Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDH12P55289 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH12P55289 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 AC006538.1-201ENST00000567905 1585 ntBASIC15.63■□□□□ 0.09
CDH12P55289 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDH12P55289 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 KRT16P4-201ENST00000453883 522 ntBASIC15.63■□□□□ 0.09
CDH12P55289 HLA-J-202ENST00000469281 1241 ntBASIC15.63■□□□□ 0.09
CDH12P55289 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CDH12P55289 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDH12P55289 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH12P55289 AC010331.1-201ENST00000611423 582 ntBASIC15.63■□□□□ 0.09
CDH12P55289 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.63■□□□□ 0.09
CDH12P55289 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH12P55289 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 LINC00554-201ENST00000564841 3011 ntBASIC15.63■□□□□ 0.09
CDH12P55289 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH12P55289 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH12P55289 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDH12P55289 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 MTHFR-217ENST00000641820 1569 ntBASIC15.62■□□□□ 0.09
CDH12P55289 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CDH12P55289 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH12P55289 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.62■□□□□ 0.09
CDH12P55289 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.62■□□□□ 0.09
CDH12P55289 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH12P55289 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CDH12P55289 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 AC105917.1-201ENST00000506637 2539 ntBASIC15.62■□□□□ 0.09
CDH12P55289 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CDH12P55289 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH12P55289 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms