Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC055876.2-201ENST00000531834 546 ntBASIC18.32■□□□□ 0.52
ATN1P54259 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.32■□□□□ 0.52
ATN1P54259 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.32■□□□□ 0.52
ATN1P54259 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 CTBP2P3-201ENST00000585629 1255 ntBASIC18.32■□□□□ 0.52
ATN1P54259 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ATN1P54259 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.32■□□□□ 0.52
ATN1P54259 AL109620.1-201ENST00000618738 1197 ntBASIC18.32■□□□□ 0.52
ATN1P54259 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATN1P54259 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.32■□□□□ 0.52
ATN1P54259 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
ATN1P54259 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.31■□□□□ 0.52
ATN1P54259 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.31■□□□□ 0.52
ATN1P54259 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
ATN1P54259 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATN1P54259 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.31■□□□□ 0.52
ATN1P54259 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 KRT223P-202ENST00000449164 1292 ntBASIC18.31■□□□□ 0.52
ATN1P54259 AC098859.1-201ENST00000502915 1238 ntBASIC18.31■□□□□ 0.52
ATN1P54259 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ATN1P54259 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.31■□□□□ 0.52
ATN1P54259 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.31■□□□□ 0.52
ATN1P54259 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.31■□□□□ 0.52
ATN1P54259 AC133552.6-201ENST00000613406 534 ntBASIC18.31■□□□□ 0.52
ATN1P54259 MIR6775-201ENST00000617557 69 ntBASIC18.31■□□□□ 0.52
ATN1P54259 COX11-210ENST00000639671 696 ntBASIC18.31■□□□□ 0.52
ATN1P54259 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
ATN1P54259 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ATN1P54259 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATN1P54259 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATN1P54259 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATN1P54259 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.31■□□□□ 0.52
ATN1P54259 AL021920.2-201ENST00000624828 1351 ntBASIC18.3■□□□□ 0.52
ATN1P54259 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
ATN1P54259 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
ATN1P54259 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.3■□□□□ 0.52
ATN1P54259 TNXA-203ENST00000507684 2038 ntBASIC18.3■□□□□ 0.52
ATN1P54259 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ATN1P54259 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.3■□□□□ 0.52
ATN1P54259 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATN1P54259 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.3■□□□□ 0.52
ATN1P54259 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.3■□□□□ 0.52
ATN1P54259 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.3■□□□□ 0.52
ATN1P54259 TPRX2P-201ENST00000535362 881 ntBASIC18.3■□□□□ 0.52
ATN1P54259 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.3■□□□□ 0.52
ATN1P54259 SNX29P1-201ENST00000548357 1007 ntBASIC18.3■□□□□ 0.52
ATN1P54259 MIR4538-201ENST00000581377 78 ntBASIC18.3■□□□□ 0.52
ATN1P54259 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.3■□□□□ 0.52
ATN1P54259 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.3■□□□□ 0.52
ATN1P54259 AC099568.2-201ENST00000609194 695 ntBASIC18.3■□□□□ 0.52
ATN1P54259 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.3■□□□□ 0.52
ATN1P54259 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.3■□□□□ 0.52
ATN1P54259 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATN1P54259 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
ATN1P54259 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.3■□□□□ 0.52
ATN1P54259 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATN1P54259 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms