Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 GIMAP3P-201ENST00000495150 836 ntBASIC23.54■■□□□ 1.36
CLTCL1P53675 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC23.54■■□□□ 1.36
CLTCL1P53675 SRD5A3P1-201ENST00000603021 949 ntBASIC23.54■■□□□ 1.36
CLTCL1P53675 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC23.54■■□□□ 1.36
CLTCL1P53675 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CLTCL1P53675 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC23.54■■□□□ 1.36
CLTCL1P53675 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CLTCL1P53675 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
CLTCL1P53675 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC23.54■■□□□ 1.36
CLTCL1P53675 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 AC007541.1-201ENST00000570282 1469 ntBASIC23.53■■□□□ 1.36
CLTCL1P53675 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 AL136982.4-201ENST00000437689 1740 ntBASIC23.53■■□□□ 1.36
CLTCL1P53675 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC23.53■■□□□ 1.36
CLTCL1P53675 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CLTCL1P53675 CYP4F24P-201ENST00000586049 1580 ntBASIC23.53■■□□□ 1.36
CLTCL1P53675 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CLTCL1P53675 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC23.53■■□□□ 1.36
CLTCL1P53675 AC092337.1-201ENST00000568699 1129 ntBASIC23.53■■□□□ 1.36
CLTCL1P53675 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC23.53■■□□□ 1.36
CLTCL1P53675 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC23.53■■□□□ 1.36
CLTCL1P53675 AL391069.4-201ENST00000609583 481 ntBASIC23.53■■□□□ 1.36
CLTCL1P53675 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
CLTCL1P53675 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC23.53■■□□□ 1.36
CLTCL1P53675 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CLTCL1P53675 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLTCL1P53675 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC23.53■■□□□ 1.36
CLTCL1P53675 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC23.52■■□□□ 1.36
CLTCL1P53675 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC23.52■■□□□ 1.36
CLTCL1P53675 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CLTCL1P53675 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC23.52■■□□□ 1.36
CLTCL1P53675 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CLTCL1P53675 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC23.52■■□□□ 1.36
CLTCL1P53675 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.52■■□□□ 1.36
CLTCL1P53675 HILS1-202ENST00000545329 423 ntBASIC23.52■■□□□ 1.36
CLTCL1P53675 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC23.52■■□□□ 1.36
CLTCL1P53675 AC132938.2-201ENST00000579188 680 ntBASIC23.52■■□□□ 1.36
CLTCL1P53675 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CLTCL1P53675 AL591163.1-201ENST00000641757 987 ntBASIC23.52■■□□□ 1.36
CLTCL1P53675 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CLTCL1P53675 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.52■■□□□ 1.36
CLTCL1P53675 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.52■■□□□ 1.36
CLTCL1P53675 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CLTCL1P53675 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC23.52■■□□□ 1.36
CLTCL1P53675 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLTCL1P53675 AC098850.1-201ENST00000419919 790 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 HIST3H2BA-201ENST00000436555 524 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CLTCL1P53675 PTK7-212ENST00000476760 902 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 DOC2GP-202ENST00000514950 1163 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 MIR4321-201ENST00000592276 80 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 TEX48-202ENST00000612244 662 ntTSL 3 BASIC23.51■■□□□ 1.35
CLTCL1P53675 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC23.51■■□□□ 1.35
CLTCL1P53675 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CLTCL1P53675 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC23.51■■□□□ 1.35
CLTCL1P53675 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
CLTCL1P53675 KRT17P7-201ENST00000451704 1104 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms