Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PRIM2P49643 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 AL391256.1-201ENST00000443260 1855 ntBASIC15.97■□□□□ 0.15
PRIM2P49643 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.96■□□□□ 0.15
PRIM2P49643 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PRIM2P49643 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.96■□□□□ 0.15
PRIM2P49643 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PRIM2P49643 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 AC068418.2-201ENST00000577309 3703 ntBASIC15.96■□□□□ 0.15
PRIM2P49643 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.96■□□□□ 0.15
PRIM2P49643 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PRIM2P49643 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.96■□□□□ 0.15
PRIM2P49643 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.96■□□□□ 0.15
PRIM2P49643 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.96■□□□□ 0.15
PRIM2P49643 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
PRIM2P49643 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.96■□□□□ 0.15
PRIM2P49643 AL589182.2-201ENST00000619332 1049 ntBASIC15.96■□□□□ 0.15
PRIM2P49643 REXO1L6P-202ENST00000619970 1078 ntBASIC15.96■□□□□ 0.15
PRIM2P49643 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.96■□□□□ 0.15
PRIM2P49643 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRIM2P49643 HLA-A-202ENST00000376806 1854 ntBASIC15.96■□□□□ 0.15
PRIM2P49643 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.96■□□□□ 0.15
PRIM2P49643 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.96■□□□□ 0.15
PRIM2P49643 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PRIM2P49643 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRIM2P49643 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PRIM2P49643 AC126755.1-201ENST00000525846 6405 ntBASIC15.96■□□□□ 0.14
PRIM2P49643 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRIM2P49643 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRIM2P49643 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
PRIM2P49643 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.96■□□□□ 0.14
PRIM2P49643 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.96■□□□□ 0.14
PRIM2P49643 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PRIM2P49643 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRIM2P49643 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PRIM2P49643 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.95■□□□□ 0.14
PRIM2P49643 SAPCD2P3-201ENST00000455031 850 ntBASIC15.95■□□□□ 0.14
PRIM2P49643 FGFR3P6-201ENST00000457012 610 ntBASIC15.95■□□□□ 0.14
PRIM2P49643 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.95■□□□□ 0.14
PRIM2P49643 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.95■□□□□ 0.14
PRIM2P49643 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.95■□□□□ 0.14
PRIM2P49643 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.95■□□□□ 0.14
PRIM2P49643 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PRIM2P49643 AC067930.6-201ENST00000623257 4947 ntBASIC15.95■□□□□ 0.14
PRIM2P49643 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRIM2P49643 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms