Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.27□□□□□ -0.28
CDC34P49427 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.27□□□□□ -0.28
CDC34P49427 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CDC34P49427 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.27□□□□□ -0.28
CDC34P49427 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.27□□□□□ -0.29
CDC34P49427 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
CDC34P49427 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.27□□□□□ -0.29
CDC34P49427 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 AC142381.4-202ENST00000563973 229 ntBASIC13.27□□□□□ -0.29
CDC34P49427 MIR4785-201ENST00000585005 73 ntBASIC13.27□□□□□ -0.29
CDC34P49427 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 AC092666.2-201ENST00000613287 246 ntBASIC13.27□□□□□ -0.29
CDC34P49427 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.27□□□□□ -0.29
CDC34P49427 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC34P49427 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 AC099063.4-201ENST00000641099 1602 ntBASIC13.27□□□□□ -0.29
CDC34P49427 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CDC34P49427 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.27□□□□□ -0.29
CDC34P49427 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.27□□□□□ -0.29
CDC34P49427 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
CDC34P49427 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CDC34P49427 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC34P49427 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
CDC34P49427 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 OR2I1P-209ENST00000641730 5365 ntBASIC13.26□□□□□ -0.29
CDC34P49427 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CDC34P49427 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 ECEL1P3-201ENST00000427961 737 ntBASIC13.26□□□□□ -0.29
CDC34P49427 AC103564.2-201ENST00000432853 1299 ntBASIC13.26□□□□□ -0.29
CDC34P49427 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC34P49427 AC122714.2-201ENST00000502787 707 ntBASIC13.26□□□□□ -0.29
CDC34P49427 STK19B-204ENST00000512515 211 ntBASIC13.26□□□□□ -0.29
CDC34P49427 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 CD99P1-205ENST00000527459 561 ntBASIC13.26□□□□□ -0.29
CDC34P49427 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CDC34P49427 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC34P49427 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC34P49427 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CDC34P49427 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 LINC00895-201ENST00000629028 1637 ntBASIC13.26□□□□□ -0.29
CDC34P49427 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
CDC34P49427 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms