Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HADHAP40939 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.94■□□□□ 0.3
HADHAP40939 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 AC009078.2-202ENST00000463353 338 ntBASIC16.94■□□□□ 0.3
HADHAP40939 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.94■□□□□ 0.3
HADHAP40939 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 AL139011.1-202ENST00000642063 584 ntBASIC16.94■□□□□ 0.3
HADHAP40939 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 AC129492.6-201ENST00000611383 1305 ntBASIC16.94■□□□□ 0.3
HADHAP40939 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.94■□□□□ 0.3
HADHAP40939 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HADHAP40939 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HADHAP40939 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HADHAP40939 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.93■□□□□ 0.3
HADHAP40939 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 MRPL20P1-201ENST00000400819 433 ntBASIC16.93■□□□□ 0.3
HADHAP40939 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 RNA5SP419-201ENST00000515908 135 ntBASIC16.93■□□□□ 0.3
HADHAP40939 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.93■□□□□ 0.3
HADHAP40939 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.93■□□□□ 0.3
HADHAP40939 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.93■□□□□ 0.3
HADHAP40939 AC116407.3-201ENST00000623905 1129 ntBASIC16.93■□□□□ 0.3
HADHAP40939 AC117500.6-201ENST00000624871 588 ntBASIC16.93■□□□□ 0.3
HADHAP40939 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.93■□□□□ 0.3
HADHAP40939 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HADHAP40939 AC026691.1-201ENST00000602502 2017 ntBASIC16.92■□□□□ 0.3
HADHAP40939 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.92■□□□□ 0.3
HADHAP40939 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.92■□□□□ 0.3
HADHAP40939 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.92■□□□□ 0.3
HADHAP40939 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HADHAP40939 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.92■□□□□ 0.3
HADHAP40939 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 SLC25A6P2-201ENST00000497974 877 ntBASIC16.92■□□□□ 0.3
HADHAP40939 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.92■□□□□ 0.3
HADHAP40939 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HADHAP40939 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.92■□□□□ 0.3
HADHAP40939 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HADHAP40939 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HADHAP40939 AL049840.3-201ENST00000602669 611 ntBASIC16.92■□□□□ 0.3
HADHAP40939 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.92■□□□□ 0.3
HADHAP40939 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 AC006538.1-201ENST00000567905 1585 ntBASIC16.92■□□□□ 0.3
HADHAP40939 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.92■□□□□ 0.3
HADHAP40939 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.92■□□□□ 0.3
HADHAP40939 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.92■□□□□ 0.3
HADHAP40939 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms